Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm14213-201ENSMUST00000119778 768 ntBASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm16397-201ENSMUST00000122201 494 ntBASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm13981-201ENSMUST00000122360 447 ntBASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm16288-201ENSMUST00000137940 367 ntBASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm24346-201ENSMUST00000158712 194 ntBASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm42430-201ENSMUST00000197209 616 ntBASIC12.69□□□□□ -0.38
Alx1Q8C8B0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Alx1Q8C8B0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gm11544-201ENSMUST00000120215 382 ntBASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gm14993-201ENSMUST00000121180 164 ntBASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gm12950-201ENSMUST00000121683 417 ntBASIC12.68□□□□□ -0.38
Alx1Q8C8B0 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gm43969-201ENSMUST00000204833 535 ntBASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gm35713-201ENSMUST00000210516 199 ntBASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Alx1Q8C8B0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms