Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm12389-201ENSMUST00000117696 418 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm12274-201ENSMUST00000120062 385 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm5244-201ENSMUST00000164001 339 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm26134-201ENSMUST00000178484 110 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm44126-201ENSMUST00000204831 514 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm44814-201ENSMUST00000207018 434 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trub1Q8C0D0 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm12516-201ENSMUST00000120819 385 ntBASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm13117-201ENSMUST00000120894 691 ntBASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm5523-201ENSMUST00000180415 997 ntBASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm33080-201ENSMUST00000205429 172 ntBASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm8285-201ENSMUST00000208293 759 ntBASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trub1Q8C0D0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm13019-201ENSMUST00000120000 276 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms