Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm37852-201ENSMUST00000193027 350 ntBASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm6991-201ENSMUST00000218475 1178 ntBASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm12337-201ENSMUST00000119634 400 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm4917-201ENSMUST00000121452 650 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm9899-201ENSMUST00000065519 555 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm10020-201ENSMUST00000081993 612 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scaf4Q6PFF0 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gm12419-201ENSMUST00000116649 636 ntBASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gm14208-201ENSMUST00000119645 678 ntBASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gm13350-201ENSMUST00000120519 479 ntBASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gm7584-201ENSMUST00000175829 940 ntBASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gm43630-201ENSMUST00000201550 776 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms