Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rad54bQ6PFE3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Mir6927-201ENSMUST00000184494 71 ntBASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gm17831-201ENSMUST00000205579 900 ntBASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rad54bQ6PFE3 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm11949-201ENSMUST00000117640 372 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm16165-201ENSMUST00000160140 795 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm19353-201ENSMUST00000184561 445 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm8197-202ENSMUST00000193422 934 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm37826-201ENSMUST00000195329 322 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm44155-201ENSMUST00000203923 412 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms