Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Gm13422-201ENSMUST00000118834 504 ntBASIC12.04□□□□□ -0.48
Ift88Q61371 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.04□□□□□ -0.48
Ift88Q61371 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.04□□□□□ -0.48
Ift88Q61371 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Gm5865-201ENSMUST00000198713 637 ntBASIC12.04□□□□□ -0.48
Ift88Q61371 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.04□□□□□ -0.48
Ift88Q61371 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ift88Q61371 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.04□□□□□ -0.48
Ift88Q61371 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ift88Q61371 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ift88Q61371 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ift88Q61371 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ift88Q61371 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ift88Q61371 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.03□□□□□ -0.48
Ift88Q61371 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.03□□□□□ -0.48
Ift88Q61371 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ift88Q61371 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ift88Q61371 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.03□□□□□ -0.48
Ift88Q61371 Snord55-201ENSMUST00000174939 79 ntBASIC12.03□□□□□ -0.48
Ift88Q61371 Gm37852-201ENSMUST00000193027 350 ntBASIC12.03□□□□□ -0.48
Ift88Q61371 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.03□□□□□ -0.48
Ift88Q61371 Gm19091-201ENSMUST00000208120 978 ntBASIC12.03□□□□□ -0.48
Ift88Q61371 AC137950.2-201ENSMUST00000227127 1089 ntBASIC12.03□□□□□ -0.48
Ift88Q61371 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ift88Q61371 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ift88Q61371 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ift88Q61371 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ift88Q61371 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ift88Q61371 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ift88Q61371 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ift88Q61371 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ift88Q61371 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ift88Q61371 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ift88Q61371 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Ift88Q61371 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.02□□□□□ -0.48
Ift88Q61371 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ift88Q61371 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ift88Q61371 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.02□□□□□ -0.48
Ift88Q61371 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ift88Q61371 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Gm43372-201ENSMUST00000202662 3016 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ift88Q61371 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.02□□□□□ -0.49
Ift88Q61371 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.02□□□□□ -0.49
Ift88Q61371 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Gm12217-201ENSMUST00000118858 696 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.02□□□□□ -0.49
Ift88Q61371 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.02□□□□□ -0.49
Ift88Q61371 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.02□□□□□ -0.49
Ift88Q61371 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Gm23045-201ENSMUST00000175041 96 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 Mir6927-201ENSMUST00000184494 71 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Gm37905-201ENSMUST00000195310 341 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Mir7686-201ENSMUST00000200604 57 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 Gm45398-201ENSMUST00000210561 165 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 Mt1-202ENSMUST00000211807 1085 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.02□□□□□ -0.49
Ift88Q61371 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ift88Q61371 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
Ift88Q61371 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms