Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Syne3Q4FZC9 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm11667-201ENSMUST00000119828 486 ntBASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm13182-201ENSMUST00000122241 312 ntBASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm22138-201ENSMUST00000158748 128 ntBASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm23680-201ENSMUST00000083162 164 ntBASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm10263-201ENSMUST00000085163 300 ntBASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Syne3Q4FZC9 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.6□□□□□ -0.55
Syne3Q4FZC9 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Gm14892-201ENSMUST00000117636 267 ntBASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Gm14665-201ENSMUST00000122294 557 ntBASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Gm24514-201ENSMUST00000174961 285 ntBASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Gm44323-201ENSMUST00000198689 129 ntBASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Syne3Q4FZC9 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms