Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Rprl1-201ENSMUST00000158050 327 ntBASIC8.92□□□□□ -0.98
Trim63Q38HM4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC8.92□□□□□ -0.98
Trim63Q38HM4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 AC238811.1-201ENSMUST00000225302 441 ntBASIC8.92□□□□□ -0.98
Trim63Q38HM4 AC125209.1-201ENSMUST00000225812 766 ntBASIC8.92□□□□□ -0.98
Trim63Q38HM4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gm26649-201ENSMUST00000181595 3196 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gmeb2-201ENSMUST00000049032 4121 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Rfx2-201ENSMUST00000002444 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim63Q38HM4 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Cald1-203ENSMUST00000115021 4041 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.91□□□□□ -0.98
Trim63Q38HM4 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Brip1os-202ENSMUST00000143819 2604 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Dctn4-202ENSMUST00000223590 1530 ntBASIC8.91□□□□□ -0.98
Trim63Q38HM4 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm13142-201ENSMUST00000117213 1453 ntBASIC8.91□□□□□ -0.98
Trim63Q38HM4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Lonp2-203ENSMUST00000122188 2372 ntTSL 2 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Usp10-202ENSMUST00000108988 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Fgf17-202ENSMUST00000227123 1336 ntBASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm13123-201ENSMUST00000122173 492 ntBASIC8.91□□□□□ -0.98
Trim63Q38HM4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm28450-201ENSMUST00000187349 638 ntBASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 AC124732.2-201ENSMUST00000221977 316 ntBASIC8.91□□□□□ -0.98
Trim63Q38HM4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm15666-202ENSMUST00000219490 2796 ntBASIC8.91□□□□□ -0.98
Trim63Q38HM4 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.91□□□□□ -0.98
Trim63Q38HM4 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Rffl-204ENSMUST00000093975 3575 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim63Q38HM4 Lrrc71-201ENSMUST00000023846 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Gcom1-204ENSMUST00000166843 1521 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim63Q38HM4 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms