Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SobpQ0P5V2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
SobpQ0P5V2 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SobpQ0P5V2 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SobpQ0P5V2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SobpQ0P5V2 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SobpQ0P5V2 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.44□□□□□ -0.42
SobpQ0P5V2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.44□□□□□ -0.42
SobpQ0P5V2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Gm27953-201ENSMUST00000185171 143 ntBASIC12.44□□□□□ -0.42
SobpQ0P5V2 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Gm8162-201ENSMUST00000213951 665 ntBASIC12.44□□□□□ -0.42
SobpQ0P5V2 Gm7664-201ENSMUST00000221988 745 ntBASIC12.44□□□□□ -0.42
SobpQ0P5V2 AC116390.1-201ENSMUST00000227975 670 ntBASIC12.44□□□□□ -0.42
SobpQ0P5V2 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.44□□□□□ -0.42
SobpQ0P5V2 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.44□□□□□ -0.42
SobpQ0P5V2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.44□□□□□ -0.42
SobpQ0P5V2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm6141-201ENSMUST00000117181 695 ntBASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm22481-201ENSMUST00000122562 192 ntBASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm24346-201ENSMUST00000158712 194 ntBASIC12.43□□□□□ -0.42
SobpQ0P5V2 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm6463-201ENSMUST00000182090 966 ntBASIC12.43□□□□□ -0.42
SobpQ0P5V2 Mir6909-201ENSMUST00000184212 62 ntBASIC12.43□□□□□ -0.42
SobpQ0P5V2 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 AC108416.3-201ENSMUST00000226148 557 ntBASIC12.43□□□□□ -0.42
SobpQ0P5V2 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.43□□□□□ -0.42
SobpQ0P5V2 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SobpQ0P5V2 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC12.42□□□□□ -0.42
SobpQ0P5V2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SobpQ0P5V2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SobpQ0P5V2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms