Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rad50P70388 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rad50P70388 Gm15197-201ENSMUST00000120526 478 ntBASIC13.12□□□□□ -0.31
Rad50P70388 Gm11980-201ENSMUST00000121445 986 ntBASIC13.12□□□□□ -0.31
Rad50P70388 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rad50P70388 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rad50P70388 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.12□□□□□ -0.31
Rad50P70388 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.12□□□□□ -0.31
Rad50P70388 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.12□□□□□ -0.31
Rad50P70388 Gm6423-201ENSMUST00000204315 934 ntBASIC13.12□□□□□ -0.31
Rad50P70388 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.12□□□□□ -0.31
Rad50P70388 Gm18042-201ENSMUST00000219887 790 ntBASIC13.12□□□□□ -0.31
Rad50P70388 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.12□□□□□ -0.31
Rad50P70388 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.12□□□□□ -0.31
Rad50P70388 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rad50P70388 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rad50P70388 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rad50P70388 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC13.12□□□□□ -0.31
Rad50P70388 Gm10548-201ENSMUST00000097631 2629 ntBASIC13.11□□□□□ -0.31
Rad50P70388 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rad50P70388 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rad50P70388 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Rad50P70388 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rad50P70388 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rad50P70388 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.11□□□□□ -0.31
Rad50P70388 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rad50P70388 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC13.11□□□□□ -0.31
Rad50P70388 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 AA474408-201ENSMUST00000098110 3339 ntBASIC13.11□□□□□ -0.31
Rad50P70388 Gm24791-201ENSMUST00000104284 131 ntBASIC13.11□□□□□ -0.31
Rad50P70388 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.11□□□□□ -0.31
Rad50P70388 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.11□□□□□ -0.31
Rad50P70388 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
Rad50P70388 Gm3828-201ENSMUST00000121817 257 ntBASIC13.11□□□□□ -0.31
Rad50P70388 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.11□□□□□ -0.31
Rad50P70388 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Gm24248-201ENSMUST00000157321 322 ntBASIC13.11□□□□□ -0.31
Rad50P70388 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC13.11□□□□□ -0.31
Rad50P70388 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.11□□□□□ -0.31
Rad50P70388 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.11□□□□□ -0.31
Rad50P70388 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rad50P70388 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rad50P70388 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rad50P70388 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rad50P70388 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Rad50P70388 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.1□□□□□ -0.31
Rad50P70388 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.1□□□□□ -0.31
Rad50P70388 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.1□□□□□ -0.31
Rad50P70388 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Rad50P70388 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Rad50P70388 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.1□□□□□ -0.31
Rad50P70388 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.1□□□□□ -0.31
Rad50P70388 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rad50P70388 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.1□□□□□ -0.31
Rad50P70388 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rad50P70388 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rad50P70388 Gm11560-201ENSMUST00000117567 948 ntBASIC13.1□□□□□ -0.31
Rad50P70388 Gm25343-201ENSMUST00000157460 107 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms