Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cux2P70298 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cux2P70298 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cux2P70298 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Gm25723-201ENSMUST00000104530 126 ntBASIC17.55■□□□□ 0.4
Cux2P70298 Gm11701-201ENSMUST00000121277 1142 ntBASIC17.55■□□□□ 0.4
Cux2P70298 Gm25319-201ENSMUST00000122552 325 ntBASIC17.55■□□□□ 0.4
Cux2P70298 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC17.55■□□□□ 0.4
Cux2P70298 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cux2P70298 Gm37141-201ENSMUST00000191938 422 ntBASIC17.55■□□□□ 0.4
Cux2P70298 Gm34780-201ENSMUST00000193896 949 ntBASIC17.55■□□□□ 0.4
Cux2P70298 AC153948.2-201ENSMUST00000218112 505 ntBASIC17.55■□□□□ 0.4
Cux2P70298 AC140393.4-201ENSMUST00000226994 765 ntBASIC17.55■□□□□ 0.4
Cux2P70298 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Cux2P70298 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Cux2P70298 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cux2P70298 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Cux2P70298 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Mir675-201ENSMUST00000102320 84 ntBASIC17.55■□□□□ 0.4
Cux2P70298 Hsd17b13-203ENSMUST00000120320 1118 ntTSL 5 BASIC17.55■□□□□ 0.4
Cux2P70298 Gm13217-201ENSMUST00000120466 953 ntBASIC17.55■□□□□ 0.4
Cux2P70298 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC17.55■□□□□ 0.4
Cux2P70298 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cux2P70298 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC17.55■□□□□ 0.4
Cux2P70298 Gm19566-201ENSMUST00000199576 610 ntBASIC17.55■□□□□ 0.4
Cux2P70298 Gm44139-201ENSMUST00000204903 373 ntBASIC17.55■□□□□ 0.4
Cux2P70298 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cux2P70298 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cux2P70298 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cux2P70298 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cux2P70298 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cux2P70298 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cux2P70298 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC17.54■□□□□ 0.4
Cux2P70298 Gm32914-201ENSMUST00000203815 2228 ntBASIC17.54■□□□□ 0.4
Cux2P70298 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cux2P70298 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC17.54■□□□□ 0.4
Cux2P70298 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cux2P70298 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cux2P70298 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Cux2P70298 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC17.54■□□□□ 0.4
Cux2P70298 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cux2P70298 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC17.54■□□□□ 0.4
Cux2P70298 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC17.54■□□□□ 0.4
Cux2P70298 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cux2P70298 Gm16301-201ENSMUST00000161959 295 ntBASIC17.54■□□□□ 0.4
Cux2P70298 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC17.54■□□□□ 0.4
Cux2P70298 Gm7924-201ENSMUST00000203975 785 ntBASIC17.54■□□□□ 0.4
Cux2P70298 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cux2P70298 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC17.54■□□□□ 0.4
Cux2P70298 Gm6129-201ENSMUST00000220725 801 ntBASIC17.54■□□□□ 0.4
Cux2P70298 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC17.54■□□□□ 0.4
Cux2P70298 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cux2P70298 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 AC160138.2-201ENSMUST00000220255 1531 ntBASIC17.53■□□□□ 0.4
Cux2P70298 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cux2P70298 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Gm45170-201ENSMUST00000206746 1671 ntBASIC17.53■□□□□ 0.4
Cux2P70298 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cux2P70298 Gm22582-201ENSMUST00000102283 94 ntBASIC17.53■□□□□ 0.4
Cux2P70298 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Gm11191-201ENSMUST00000117231 610 ntBASIC17.53■□□□□ 0.4
Cux2P70298 Gm5865-201ENSMUST00000198713 637 ntBASIC17.53■□□□□ 0.4
Cux2P70298 AC124400.2-201ENSMUST00000224939 253 ntBASIC17.53■□□□□ 0.4
Cux2P70298 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cux2P70298 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cux2P70298 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Cux2P70298 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cux2P70298 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC17.53■□□□□ 0.4
Cux2P70298 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cux2P70298 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC17.52■□□□□ 0.4
Cux2P70298 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cux2P70298 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cux2P70298 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cux2P70298 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cux2P70298 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cux2P70298 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms