Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Hmgb1P63158 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Hmgb1P63158 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.08□□□□□ -0.48
Hmgb1P63158 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmgb1P63158 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.08□□□□□ -0.48
Hmgb1P63158 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hmgb1P63158 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm9062-201ENSMUST00000117712 727 ntBASIC12.08□□□□□ -0.48
Hmgb1P63158 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm4726-201ENSMUST00000135604 736 ntBASIC12.08□□□□□ -0.48
Hmgb1P63158 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm6019-201ENSMUST00000148369 736 ntBASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.08□□□□□ -0.48
Hmgb1P63158 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.08□□□□□ -0.48
Hmgb1P63158 Spcs1-203ENSMUST00000226374 592 ntBASIC12.08□□□□□ -0.48
Hmgb1P63158 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.08□□□□□ -0.48
Hmgb1P63158 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.08□□□□□ -0.48
Hmgb1P63158 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Hmgb1P63158 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgb1P63158 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.08□□□□□ -0.48
Hmgb1P63158 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hmgb1P63158 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 AC183268.1-201ENSMUST00000215753 2837 ntBASIC12.07□□□□□ -0.48
Hmgb1P63158 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Chad-201ENSMUST00000040418 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Hmgb1P63158 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.07□□□□□ -0.48
Hmgb1P63158 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.07□□□□□ -0.48
Hmgb1P63158 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hmgb1P63158 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Gm30946-201ENSMUST00000198288 724 ntBASIC12.07□□□□□ -0.48
Hmgb1P63158 Gm32111-201ENSMUST00000207689 846 ntBASIC12.07□□□□□ -0.48
Hmgb1P63158 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmgb1P63158 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hmgb1P63158 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.07□□□□□ -0.48
Hmgb1P63158 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hmgb1P63158 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hmgb1P63158 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgb1P63158 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hmgb1P63158 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms