Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm5340-201ENSMUST00000203733 880 ntBASIC8.82□□□□□ -1
Lmo4P61969 Wbp1-209ENSMUST00000205023 716 ntBASIC8.82□□□□□ -1
Lmo4P61969 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Gm7192-201ENSMUST00000210793 1137 ntBASIC8.82□□□□□ -1
Lmo4P61969 Gm45745-201ENSMUST00000211447 1180 ntBASIC8.82□□□□□ -1
Lmo4P61969 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 CT009713.2-201ENSMUST00000225532 1149 ntBASIC8.82□□□□□ -1
Lmo4P61969 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC8.82□□□□□ -1
Lmo4P61969 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Gm6211-201ENSMUST00000147973 4275 ntBASIC8.82□□□□□ -1
Lmo4P61969 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC8.82□□□□□ -1
Lmo4P61969 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Lmo4P61969 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC8.82□□□□□ -1
Lmo4P61969 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC8.81□□□□□ -1
Lmo4P61969 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC8.81□□□□□ -1
Lmo4P61969 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Gm23595-201ENSMUST00000104306 130 ntBASIC8.81□□□□□ -1
Lmo4P61969 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Lmo4P61969 Gm12418-201ENSMUST00000118116 942 ntBASIC8.81□□□□□ -1
Lmo4P61969 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC8.81□□□□□ -1
Lmo4P61969 Gm15982-201ENSMUST00000121681 554 ntBASIC8.81□□□□□ -1
Lmo4P61969 Gm12950-201ENSMUST00000121683 417 ntBASIC8.81□□□□□ -1
Lmo4P61969 Gm20493-201ENSMUST00000173706 213 ntBASIC8.81□□□□□ -1
Lmo4P61969 Gm25998-201ENSMUST00000175397 53 ntBASIC8.81□□□□□ -1
Lmo4P61969 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC8.81□□□□□ -1
Lmo4P61969 Gm5808-201ENSMUST00000178090 357 ntBASIC8.81□□□□□ -1
Lmo4P61969 Gm24954-201ENSMUST00000178831 110 ntBASIC8.81□□□□□ -1
Lmo4P61969 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Lmo4P61969 Gm8234-201ENSMUST00000198523 1107 ntBASIC8.81□□□□□ -1
Lmo4P61969 Gm42779-201ENSMUST00000198807 406 ntBASIC8.81□□□□□ -1
Lmo4P61969 Gm42732-201ENSMUST00000202887 1197 ntBASIC8.81□□□□□ -1
Lmo4P61969 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC8.81□□□□□ -1
Lmo4P61969 AC101205.2-201ENSMUST00000226206 715 ntBASIC8.81□□□□□ -1
Lmo4P61969 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC8.81□□□□□ -1
Lmo4P61969 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Gm37422-201ENSMUST00000193794 4718 ntBASIC8.81□□□□□ -1
Lmo4P61969 Gm6560-201ENSMUST00000198588 1591 ntBASIC8.81□□□□□ -1
Lmo4P61969 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC8.81□□□□□ -1
Lmo4P61969 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC8.81□□□□□ -1
Lmo4P61969 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms