Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hoxd8P23463 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm9574-201ENSMUST00000173127 845 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm18352-201ENSMUST00000189113 902 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm7445-201ENSMUST00000192115 340 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm38384-201ENSMUST00000195413 1122 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm43787-201ENSMUST00000197792 1037 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm4870-201ENSMUST00000198525 1251 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 AC162940.1-201ENSMUST00000224745 1167 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 AC154616.1-201ENSMUST00000226995 804 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 CT025525.2-201ENSMUST00000227743 423 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm25514-201ENSMUST00000083860 135 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxd8P23463 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.4□□□□□ -0.58
Hoxd8P23463 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.4□□□□□ -0.58
Hoxd8P23463 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Gm28195-201ENSMUST00000186992 372 ntBASIC11.4□□□□□ -0.58
Hoxd8P23463 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.4□□□□□ -0.58
Hoxd8P23463 AC131743.3-201ENSMUST00000222099 662 ntBASIC11.4□□□□□ -0.58
Hoxd8P23463 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.4□□□□□ -0.58
Hoxd8P23463 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Hoxd8P23463 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.4□□□□□ -0.58
Hoxd8P23463 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Hoxd8P23463 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxd8P23463 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms