Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Col1a1P11087 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col1a1P11087 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.67□□□□□ -0.38
Col1a1P11087 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.66□□□□□ -0.38
Col1a1P11087 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Mir1190-201ENSMUST00000116925 96 ntBASIC12.66□□□□□ -0.38
Col1a1P11087 Gm7781-201ENSMUST00000117258 788 ntBASIC12.66□□□□□ -0.38
Col1a1P11087 Gm14650-201ENSMUST00000120400 889 ntBASIC12.66□□□□□ -0.38
Col1a1P11087 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.66□□□□□ -0.38
Col1a1P11087 Gm26532-201ENSMUST00000180630 690 ntBASIC12.66□□□□□ -0.38
Col1a1P11087 Gm17797-201ENSMUST00000182175 997 ntBASIC12.66□□□□□ -0.38
Col1a1P11087 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC12.66□□□□□ -0.38
Col1a1P11087 Gm6859-201ENSMUST00000218614 989 ntBASIC12.66□□□□□ -0.38
Col1a1P11087 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.66□□□□□ -0.38
Col1a1P11087 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col1a1P11087 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col1a1P11087 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Col1a1P11087 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.66□□□□□ -0.38
Col1a1P11087 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col1a1P11087 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.66□□□□□ -0.38
Col1a1P11087 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.66□□□□□ -0.38
Col1a1P11087 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.66□□□□□ -0.38
Col1a1P11087 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col1a1P11087 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm8482-201ENSMUST00000117972 471 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Gm15476-201ENSMUST00000118247 1191 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm13841-201ENSMUST00000118829 483 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Gm11449-201ENSMUST00000119175 476 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Gm13792-201ENSMUST00000121350 423 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.65□□□□□ -0.38
Col1a1P11087 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm5501-201ENSMUST00000165917 832 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm8210-201ENSMUST00000178557 483 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Gm15454-201ENSMUST00000179718 483 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Mir6396-201ENSMUST00000183603 111 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC12.65□□□□□ -0.38
Col1a1P11087 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.65□□□□□ -0.38
Col1a1P11087 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col1a1P11087 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm6344-201ENSMUST00000075962 483 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Col1a1P11087 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col1a1P11087 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col1a1P11087 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC12.65□□□□□ -0.38
Col1a1P11087 Gm17107-201ENSMUST00000170983 553 ntBASIC12.65□□□□□ -0.38
Col1a1P11087 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms