Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Pknox1O70477 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Pknox1O70477 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pknox1O70477 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.82□□□□□ -0.68
Pknox1O70477 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.82□□□□□ -0.68
Pknox1O70477 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.82□□□□□ -0.68
Pknox1O70477 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.82□□□□□ -0.68
Pknox1O70477 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.82□□□□□ -0.68
Pknox1O70477 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.82□□□□□ -0.68
Pknox1O70477 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.82□□□□□ -0.68
Pknox1O70477 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.82□□□□□ -0.68
Pknox1O70477 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.82□□□□□ -0.68
Pknox1O70477 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pknox1O70477 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pknox1O70477 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.82□□□□□ -0.68
Pknox1O70477 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pknox1O70477 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pknox1O70477 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Pknox1O70477 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pknox1O70477 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pknox1O70477 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.81□□□□□ -0.68
Pknox1O70477 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Gm3551-201ENSMUST00000190750 664 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Gm37826-201ENSMUST00000195329 322 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Gm43438-201ENSMUST00000198133 379 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Gm9555-201ENSMUST00000200908 583 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Pknox1O70477 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Gm18042-201ENSMUST00000219887 790 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.81□□□□□ -0.68
Pknox1O70477 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Pknox1O70477 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pknox1O70477 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Pknox1O70477 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pknox1O70477 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pknox1O70477 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.81□□□□□ -0.68
Pknox1O70477 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms