Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Gm11235-201ENSMUST00000117763 333 ntBASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Gm11652-201ENSMUST00000117842 1267 ntBASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Gm23521-201ENSMUST00000177845 110 ntBASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Gm26913-201ENSMUST00000182391 732 ntBASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Gm27383-201ENSMUST00000184418 361 ntBASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Gm2981-201ENSMUST00000213947 694 ntBASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc188F6WEU2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc188F6WEU2 AC134898.1-201ENSMUST00000223738 1836 ntBASIC11.02□□□□□ -0.64
Ccdc188F6WEU2 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC11.02□□□□□ -0.64
Ccdc188F6WEU2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc188F6WEU2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc188F6WEU2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Gm11771-201ENSMUST00000118124 732 ntBASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Gm8704-201ENSMUST00000197181 435 ntBASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Gm43551-201ENSMUST00000197221 440 ntBASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Gm3922-201ENSMUST00000200519 435 ntBASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc188F6WEU2 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms