Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm5292-201ENSMUST00000073317 580 ntBASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col4a6B1AVK5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm42651-201ENSMUST00000199851 1339 ntBASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm11411-201ENSMUST00000117951 719 ntBASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm16210-201ENSMUST00000122161 610 ntBASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm3355-201ENSMUST00000160079 487 ntBASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm17147-201ENSMUST00000164176 432 ntBASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm5845-201ENSMUST00000195812 796 ntBASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC11.02□□□□□ -0.64
Col4a6B1AVK5 AC157650.1-201ENSMUST00000224582 610 ntBASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Gm26205-201ENSMUST00000082907 134 ntBASIC11.02□□□□□ -0.64
Col4a6B1AVK5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col4a6B1AVK5 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm16439-201ENSMUST00000100687 564 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm14853-201ENSMUST00000116081 549 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm15702-201ENSMUST00000119680 444 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm8625-201ENSMUST00000194185 1077 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm7812-201ENSMUST00000203479 874 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 AC166061.1-201ENSMUST00000225163 1138 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Rubie-203ENSMUST00000227803 2430 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms