Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 AC153506.1-201ENSMUST00000218768 2915 ntBASIC8.81□□□□□ -1
Ccl28Q9JIL2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC8.81□□□□□ -1
Ccl28Q9JIL2 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Gm43274-201ENSMUST00000202545 5000 ntBASIC8.81□□□□□ -1
Ccl28Q9JIL2 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl28Q9JIL2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm45165-201ENSMUST00000207763 1631 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm9062-201ENSMUST00000117712 727 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm15725-201ENSMUST00000119947 1090 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm27441-201ENSMUST00000185000 105 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm28746-201ENSMUST00000187453 380 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Mir7686-201ENSMUST00000200604 57 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Spcs1-203ENSMUST00000226374 592 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 AC131330.1-201ENSMUST00000227814 1015 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm6781-201ENSMUST00000038304 1242 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm25125-201ENSMUST00000083340 136 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Gm9415-201ENSMUST00000200462 1321 ntBASIC8.8□□□□□ -1
Ccl28Q9JIL2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl28Q9JIL2 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC8.79□□□□□ -1
Ccl28Q9JIL2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC8.79□□□□□ -1
Ccl28Q9JIL2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Gm10051-201ENSMUST00000145209 414 ntBASIC8.79□□□□□ -1
Ccl28Q9JIL2 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccl28Q9JIL2 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms