Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Gm7719-201ENSMUST00000182374 975 ntBASIC14.34□□□□□ -0.11
U2af1Q9D883 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Uba52-ps-201ENSMUST00000183770 379 ntBASIC14.34□□□□□ -0.11
U2af1Q9D883 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.34□□□□□ -0.11
U2af1Q9D883 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Gm45258-201ENSMUST00000210042 853 ntBASIC14.34□□□□□ -0.11
U2af1Q9D883 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
U2af1Q9D883 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
U2af1Q9D883 Gm29245-201ENSMUST00000187332 1416 ntBASIC14.33□□□□□ -0.11
U2af1Q9D883 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC14.33□□□□□ -0.12
U2af1Q9D883 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Ighv13-1-201ENSMUST00000103480 294 ntBASIC14.33□□□□□ -0.12
U2af1Q9D883 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Gm43097-201ENSMUST00000196867 151 ntBASIC14.33□□□□□ -0.12
U2af1Q9D883 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.33□□□□□ -0.12
U2af1Q9D883 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.33□□□□□ -0.12
U2af1Q9D883 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.33□□□□□ -0.12
U2af1Q9D883 CT010480.2-201ENSMUST00000225424 737 ntBASIC14.33□□□□□ -0.12
U2af1Q9D883 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Gm42463-201ENSMUST00000198041 4886 ntBASIC14.33□□□□□ -0.12
U2af1Q9D883 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC14.33□□□□□ -0.12
U2af1Q9D883 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC14.33□□□□□ -0.12
U2af1Q9D883 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
U2af1Q9D883 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
U2af1Q9D883 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
U2af1Q9D883 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
U2af1Q9D883 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
U2af1Q9D883 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Gm24791-201ENSMUST00000104284 131 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC14.32□□□□□ -0.12
U2af1Q9D883 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Gm18733-202ENSMUST00000174447 401 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 Gm26989-201ENSMUST00000182608 749 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 Gm7047-201ENSMUST00000196224 1063 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 Gm42430-201ENSMUST00000197209 616 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 Gm44605-201ENSMUST00000206892 949 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 Gm8162-201ENSMUST00000213951 665 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 CT573086.4-201ENSMUST00000226729 342 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 Mir483-201ENSMUST00000093631 73 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
U2af1Q9D883 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
U2af1Q9D883 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms