Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc28aQ8CEI3 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm37852-201ENSMUST00000193027 350 ntBASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm5865-201ENSMUST00000198713 637 ntBASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm5369-201ENSMUST00000217499 588 ntBASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm5468-202ENSMUST00000227851 682 ntBASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms