Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gm16380-201ENSMUST00000077997 478 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gm10263-201ENSMUST00000085163 300 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Gm4294-201ENSMUST00000105169 614 ntBASIC12.76□□□□□ -0.37
Vps53Q8CCB4 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Gm17825-201ENSMUST00000206836 794 ntBASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Gm18204-201ENSMUST00000209835 793 ntBASIC12.76□□□□□ -0.37
Vps53Q8CCB4 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.76□□□□□ -0.37
Vps53Q8CCB4 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps53Q8CCB4 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm24248-201ENSMUST00000157321 322 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm8723-201ENSMUST00000166076 820 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm8701-201ENSMUST00000169259 874 ntBASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.75□□□□□ -0.37
Vps53Q8CCB4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms