Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.03□□□□□ -0.48
Trim9Q8C7M3 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.03□□□□□ -0.48
Trim9Q8C7M3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Mir6407-201ENSMUST00000184510 101 ntBASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gm5051-201ENSMUST00000204085 485 ntBASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gm7525-201ENSMUST00000219425 454 ntBASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim9Q8C7M3 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim9Q8C7M3 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Gm45594-201ENSMUST00000211717 241 ntBASIC12.02□□□□□ -0.49
Trim9Q8C7M3 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.02□□□□□ -0.49
Trim9Q8C7M3 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim9Q8C7M3 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms