Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm13624-201ENSMUST00000120263 462 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm6939-201ENSMUST00000122029 864 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm25591-201ENSMUST00000177317 94 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm8525-201ENSMUST00000189674 861 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm37944-201ENSMUST00000194233 414 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Gm10537-201ENSMUST00000192625 1698 ntBASIC12.45□□□□□ -0.42
Ddx55Q6ZPL9 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Snora68-201ENSMUST00000104375 131 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Gm14997-201ENSMUST00000119232 636 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Gm13505-201ENSMUST00000121666 817 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Gm9409-201ENSMUST00000197017 316 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Gm44487-201ENSMUST00000205145 325 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Gm44908-201ENSMUST00000208610 266 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Gm44917-201ENSMUST00000208798 520 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 AC141884.2-201ENSMUST00000228811 775 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx55Q6ZPL9 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx55Q6ZPL9 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms