Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Gm6727-201ENSMUST00000204102 1518 ntBASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Gm38038-201ENSMUST00000193803 259 ntBASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Gm45893-201ENSMUST00000211899 247 ntBASIC12.68□□□□□ -0.38
Nup98Q6PFD9 AC154461.1-201ENSMUST00000224207 1005 ntBASIC12.68□□□□□ -0.38
Nup98Q6PFD9 AC134913.2-201ENSMUST00000225017 771 ntBASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm6644-201ENSMUST00000186507 951 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm43726-201ENSMUST00000199110 775 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm2716-201ENSMUST00000212350 643 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm10344-201ENSMUST00000193498 1419 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm44304-201ENSMUST00000200509 145 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Gm44540-201ENSMUST00000205640 354 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 AC132384.2-201ENSMUST00000218018 526 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 AC165260.2-201ENSMUST00000225371 395 ntBASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nup98Q6PFD9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup98Q6PFD9 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms