Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Gm13117-201ENSMUST00000120894 691 ntBASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Snord55-201ENSMUST00000174939 79 ntBASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Gm30946-201ENSMUST00000198288 724 ntBASIC11.11□□□□□ -0.63
Casc4Q6P2L7 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Casc4Q6P2L7 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm12986-201ENSMUST00000119037 967 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm12208-201ENSMUST00000122004 163 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm24074-201ENSMUST00000158178 260 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Mir6407-201ENSMUST00000184510 101 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm34023-201ENSMUST00000195539 217 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm44158-201ENSMUST00000203881 505 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Casc4Q6P2L7 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Casc4Q6P2L7 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms