Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Pcdh1-201ENSMUST00000057185 3902 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Gm10764-202ENSMUST00000220397 2335 ntBASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Gm37737-201ENSMUST00000195013 1638 ntBASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Gm10152-201ENSMUST00000193475 1344 ntBASIC7.78□□□□□ -1.16
Cks1brtQ3UNC9 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Cks1brtQ3UNC9 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Cks1brtQ3UNC9 Adgrl3-209ENSMUST00000119385 4905 ntTSL 5 BASIC7.77□□□□□ -1.16
Cks1brtQ3UNC9 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC7.77□□□□□ -1.16
Cks1brtQ3UNC9 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Slc25a44-201ENSMUST00000057935 3577 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 AC117648.1-201ENSMUST00000219777 2510 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm26047-201ENSMUST00000157308 113 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm27701-201ENSMUST00000184498 110 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm27441-201ENSMUST00000185000 105 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm28911-201ENSMUST00000188837 117 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm37301-201ENSMUST00000195412 568 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm26047-202ENSMUST00000198840 115 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm8956-201ENSMUST00000203939 825 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm6653-201ENSMUST00000218063 1288 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm15823-201ENSMUST00000064305 670 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Mov10-207ENSMUST00000168015 3460 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Kidins220-202ENSMUST00000220459 5381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC7.77□□□□□ -1.17
Cks1brtQ3UNC9 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Pycard-201ENSMUST00000033056 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Sdc2-201ENSMUST00000022871 3527 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Gm13347-201ENSMUST00000120298 1353 ntBASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
Cks1brtQ3UNC9 Zfp114-201ENSMUST00000086010 3332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms