Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC17.59■□□□□ 0.41
Cux2P70298 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux2P70298 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux2P70298 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux2P70298 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux2P70298 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cux2P70298 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cux2P70298 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cux2P70298 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC17.59■□□□□ 0.41
Cux2P70298 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC17.59■□□□□ 0.41
Cux2P70298 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux2P70298 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC17.59■□□□□ 0.41
Cux2P70298 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux2P70298 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cux2P70298 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cux2P70298 Gm44167-201ENSMUST00000204957 1878 ntBASIC17.58■□□□□ 0.41
Cux2P70298 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cux2P70298 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cux2P70298 Gm12221-201ENSMUST00000125096 1131 ntBASIC17.58■□□□□ 0.41
Cux2P70298 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cux2P70298 Gm43066-201ENSMUST00000199589 1260 ntBASIC17.58■□□□□ 0.41
Cux2P70298 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC17.58■□□□□ 0.41
Cux2P70298 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC17.58■□□□□ 0.41
Cux2P70298 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cux2P70298 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cux2P70298 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC17.58■□□□□ 0.41
Cux2P70298 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Gm10344-201ENSMUST00000193498 1419 ntBASIC17.58■□□□□ 0.4
Cux2P70298 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Gm44907-201ENSMUST00000207423 1633 ntBASIC17.58■□□□□ 0.4
Cux2P70298 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cux2P70298 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cux2P70298 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cux2P70298 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cux2P70298 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cux2P70298 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cux2P70298 Gm14111-201ENSMUST00000119851 999 ntBASIC17.57■□□□□ 0.4
Cux2P70298 Gm13543-201ENSMUST00000121230 796 ntBASIC17.57■□□□□ 0.4
Cux2P70298 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC17.57■□□□□ 0.4
Cux2P70298 Gm20281-201ENSMUST00000188225 267 ntBASIC17.57■□□□□ 0.4
Cux2P70298 BC002189-201ENSMUST00000195674 598 ntBASIC17.57■□□□□ 0.4
Cux2P70298 Gm44936-201ENSMUST00000207324 735 ntBASIC17.57■□□□□ 0.4
Cux2P70298 Gm8055-201ENSMUST00000099956 1008 ntBASIC17.57■□□□□ 0.4
Cux2P70298 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC17.57■□□□□ 0.4
Cux2P70298 AC125374.1-201ENSMUST00000213573 1400 ntBASIC17.57■□□□□ 0.4
Cux2P70298 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cux2P70298 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Gm44806-201ENSMUST00000205574 2303 ntBASIC17.57■□□□□ 0.4
Cux2P70298 Mypopos-202ENSMUST00000205975 2321 ntBASIC17.57■□□□□ 0.4
Cux2P70298 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC17.57■□□□□ 0.4
Cux2P70298 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cux2P70298 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cux2P70298 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cux2P70298 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cux2P70298 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC17.57■□□□□ 0.4
Cux2P70298 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cux2P70298 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cux2P70298 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cux2P70298 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC17.56■□□□□ 0.4
Cux2P70298 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Cux2P70298 Gm14276-201ENSMUST00000117941 720 ntBASIC17.56■□□□□ 0.4
Cux2P70298 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC17.56■□□□□ 0.4
Cux2P70298 Gm12424-201ENSMUST00000179673 447 ntBASIC17.56■□□□□ 0.4
Cux2P70298 Gm7997-201ENSMUST00000210546 980 ntBASIC17.56■□□□□ 0.4
Cux2P70298 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cux2P70298 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cux2P70298 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC17.56■□□□□ 0.4
Cux2P70298 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cux2P70298 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cux2P70298 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cux2P70298 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Cux2P70298 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cux2P70298 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cux2P70298 Gm5910-201ENSMUST00000211819 1746 ntBASIC17.56■□□□□ 0.4
Cux2P70298 Gm45165-201ENSMUST00000207763 1631 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms