Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm37731-201ENSMUST00000194545 2237 ntBASIC12.11□□□□□ -0.47
Hmgb1P63158 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hmgb1P63158 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgb1P63158 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.11□□□□□ -0.47
Hmgb1P63158 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm19353-201ENSMUST00000184561 445 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Platr10-202ENSMUST00000191479 818 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm17831-201ENSMUST00000205579 900 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm18056-201ENSMUST00000207670 568 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm18061-201ENSMUST00000208350 562 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm18063-201ENSMUST00000208529 568 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm18052-201ENSMUST00000208750 559 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.1□□□□□ -0.47
Hmgb1P63158 AC153936.1-201ENSMUST00000219874 395 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.1□□□□□ -0.47
Hmgb1P63158 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmgb1P63158 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hmgb1P63158 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hmgb1P63158 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Gm13422-201ENSMUST00000118834 504 ntBASIC12.09□□□□□ -0.47
Hmgb1P63158 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.09□□□□□ -0.47
Hmgb1P63158 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Gm25226-201ENSMUST00000158198 123 ntBASIC12.09□□□□□ -0.47
Hmgb1P63158 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Gm7255-201ENSMUST00000187371 908 ntBASIC12.09□□□□□ -0.47
Hmgb1P63158 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.09□□□□□ -0.47
Hmgb1P63158 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.09□□□□□ -0.47
Hmgb1P63158 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.09□□□□□ -0.47
Hmgb1P63158 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Hmgb1P63158 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgb1P63158 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 114.2 ms