Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ybx1P62960 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ybx1P62960 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ybx1P62960 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ybx1P62960 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ybx1P62960 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ybx1P62960 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Ybx1P62960 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ybx1P62960 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ybx1P62960 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ybx1P62960 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Ybx1P62960 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ybx1P62960 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ybx1P62960 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.23□□□□□ -0.61
Ybx1P62960 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.23□□□□□ -0.61
Ybx1P62960 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ybx1P62960 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Ybx1P62960 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Gm12418-201ENSMUST00000118116 942 ntBASIC11.23□□□□□ -0.61
Ybx1P62960 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.23□□□□□ -0.61
Ybx1P62960 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.23□□□□□ -0.61
Ybx1P62960 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Mir6953-201ENSMUST00000184745 68 ntBASIC11.23□□□□□ -0.61
Ybx1P62960 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.23□□□□□ -0.61
Ybx1P62960 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Gm44640-201ENSMUST00000206894 247 ntBASIC11.23□□□□□ -0.61
Ybx1P62960 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.23□□□□□ -0.61
Ybx1P62960 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.23□□□□□ -0.61
Ybx1P62960 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.23□□□□□ -0.61
Ybx1P62960 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Ybx1P62960 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Ybx1P62960 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ybx1P62960 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Ybx1P62960 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ybx1P62960 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Ybx1P62960 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.23□□□□□ -0.61
Ybx1P62960 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Ybx1P62960 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.23□□□□□ -0.61
Ybx1P62960 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.23□□□□□ -0.61
Ybx1P62960 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ybx1P62960 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ybx1P62960 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Ybx1P62960 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.22□□□□□ -0.61
Ybx1P62960 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.22□□□□□ -0.61
Ybx1P62960 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Gm8019-201ENSMUST00000119317 587 ntBASIC11.22□□□□□ -0.61
Ybx1P62960 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.22□□□□□ -0.61
Ybx1P62960 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.22□□□□□ -0.61
Ybx1P62960 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ybx1P62960 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.22□□□□□ -0.61
Ybx1P62960 Gm7985-201ENSMUST00000183329 981 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms