Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Lsm6P62313 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Lsm6P62313 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.62□□□□□ -0.87
Lsm6P62313 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm6P62313 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm25766-201ENSMUST00000104101 131 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm14892-201ENSMUST00000117636 267 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.61□□□□□ -0.87
Lsm6P62313 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC9.61□□□□□ -0.87
Lsm6P62313 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm43520-201ENSMUST00000197996 164 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.61□□□□□ -0.87
Lsm6P62313 AC166992.1-201ENSMUST00000216356 565 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC9.61□□□□□ -0.87
Lsm6P62313 Id2-203ENSMUST00000222667 958 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 Nsd1-205ENSMUST00000224693 852 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Lsm6P62313 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Lsm6P62313 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.61□□□□□ -0.87
Lsm6P62313 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Lsm6P62313 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.61□□□□□ -0.87
Lsm6P62313 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Lsm6P62313 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.61□□□□□ -0.87
Lsm6P62313 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lsm6P62313 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Lsm6P62313 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Lsm6P62313 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Lsm6P62313 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms