Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm43758-201ENSMUST00000199500 367 ntBASIC12.15□□□□□ -0.46
Tpm1P58771 Gm43822-201ENSMUST00000200285 476 ntBASIC12.15□□□□□ -0.46
Tpm1P58771 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.15□□□□□ -0.46
Tpm1P58771 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Tpm1P58771 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Tpm1P58771 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tpm1P58771 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Tpm1P58771 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.15□□□□□ -0.46
Tpm1P58771 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.15□□□□□ -0.46
Tpm1P58771 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tpm1P58771 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tpm1P58771 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tpm1P58771 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tpm1P58771 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tpm1P58771 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.14□□□□□ -0.47
Tpm1P58771 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tpm1P58771 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tpm1P58771 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tpm1P58771 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Tpm1P58771 Gm24990-201ENSMUST00000157406 323 ntBASIC12.14□□□□□ -0.47
Tpm1P58771 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.14□□□□□ -0.47
Tpm1P58771 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.14□□□□□ -0.47
Tpm1P58771 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.14□□□□□ -0.47
Tpm1P58771 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.14□□□□□ -0.47
Tpm1P58771 Gm38321-201ENSMUST00000195053 235 ntBASIC12.14□□□□□ -0.47
Tpm1P58771 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Gm18730-201ENSMUST00000218038 343 ntBASIC12.14□□□□□ -0.47
Tpm1P58771 AC137950.2-201ENSMUST00000227127 1089 ntBASIC12.14□□□□□ -0.47
Tpm1P58771 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC12.14□□□□□ -0.47
Tpm1P58771 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC12.14□□□□□ -0.47
Tpm1P58771 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC12.14□□□□□ -0.47
Tpm1P58771 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tpm1P58771 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.14□□□□□ -0.47
Tpm1P58771 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.14□□□□□ -0.47
Tpm1P58771 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Tpm1P58771 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Gm21817-201ENSMUST00000178584 2583 ntBASIC12.14□□□□□ -0.47
Tpm1P58771 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tpm1P58771 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tpm1P58771 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.13□□□□□ -0.47
Tpm1P58771 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.13□□□□□ -0.47
Tpm1P58771 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.13□□□□□ -0.47
Tpm1P58771 Gm13126-201ENSMUST00000117079 3063 ntBASIC12.13□□□□□ -0.47
Tpm1P58771 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tpm1P58771 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Gm24891-201ENSMUST00000104391 136 ntBASIC12.13□□□□□ -0.47
Tpm1P58771 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Gm12579-201ENSMUST00000118040 783 ntBASIC12.13□□□□□ -0.47
Tpm1P58771 Gm12501-201ENSMUST00000119163 529 ntBASIC12.13□□□□□ -0.47
Tpm1P58771 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tpm1P58771 Gm7985-201ENSMUST00000183329 981 ntBASIC12.13□□□□□ -0.47
Tpm1P58771 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.13□□□□□ -0.47
Tpm1P58771 Gm7504-201ENSMUST00000201449 424 ntBASIC12.13□□□□□ -0.47
Tpm1P58771 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Tpm1P58771 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.13□□□□□ -0.47
Tpm1P58771 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.13□□□□□ -0.47
Tpm1P58771 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.13□□□□□ -0.47
Tpm1P58771 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tpm1P58771 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms