Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm5996-201ENSMUST00000211110 718 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox18P43680 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox18P43680 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.87□□□□□ -0.67
Sox18P43680 AC169511.1-201ENSMUST00000227639 995 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox18P43680 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox18P43680 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox18P43680 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox18P43680 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.87□□□□□ -0.67
Sox18P43680 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.87□□□□□ -0.67
Sox18P43680 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox18P43680 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Sox18P43680 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Gm12792-201ENSMUST00000117669 1019 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Gm13624-201ENSMUST00000120263 462 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox18P43680 Gm14253-201ENSMUST00000122112 639 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.86□□□□□ -0.67
Sox18P43680 Gm13827-201ENSMUST00000148801 372 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.86□□□□□ -0.67
Sox18P43680 Gm7211-201ENSMUST00000172692 1118 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Mir3473a-201ENSMUST00000175011 78 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.86□□□□□ -0.67
Sox18P43680 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Gm37241-201ENSMUST00000191736 523 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Gm37851-201ENSMUST00000193871 889 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Gm33707-201ENSMUST00000195135 569 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Gm19169-201ENSMUST00000220109 1246 ntBASIC10.86□□□□□ -0.67
Sox18P43680 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox18P43680 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox18P43680 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox18P43680 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox18P43680 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox18P43680 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox18P43680 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.86□□□□□ -0.67
Sox18P43680 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Gm37396-201ENSMUST00000191827 1495 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms