Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm24891-201ENSMUST00000104391 136 ntBASIC8.97□□□□□ -0.97
VhlP40338 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Gm14398-201ENSMUST00000117287 1073 ntBASIC8.97□□□□□ -0.97
VhlP40338 Gm14130-201ENSMUST00000118417 987 ntBASIC8.97□□□□□ -0.97
VhlP40338 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC8.97□□□□□ -0.97
VhlP40338 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC8.97□□□□□ -0.97
VhlP40338 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
VhlP40338 Gm21778-201ENSMUST00000178779 471 ntBASIC8.97□□□□□ -0.97
VhlP40338 Gm4812-201ENSMUST00000182847 993 ntBASIC8.97□□□□□ -0.97
VhlP40338 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC8.97□□□□□ -0.97
VhlP40338 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC8.97□□□□□ -0.97
VhlP40338 Gm28624-201ENSMUST00000186430 2131 ntBASIC8.97□□□□□ -0.97
VhlP40338 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC8.97□□□□□ -0.97
VhlP40338 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
VhlP40338 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
VhlP40338 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
VhlP40338 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
VhlP40338 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
VhlP40338 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VhlP40338 AC122382.1-201ENSMUST00000225869 2371 ntBASIC8.97□□□□□ -0.97
VhlP40338 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
VhlP40338 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
VhlP40338 Phtf1os-201ENSMUST00000160110 4046 ntBASIC8.96□□□□□ -0.97
VhlP40338 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
VhlP40338 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC8.96□□□□□ -0.97
VhlP40338 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VhlP40338 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VhlP40338 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VhlP40338 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
VhlP40338 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
VhlP40338 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC8.96□□□□□ -0.97
VhlP40338 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VhlP40338 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VhlP40338 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VhlP40338 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
VhlP40338 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
VhlP40338 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
VhlP40338 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
VhlP40338 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
VhlP40338 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC8.96□□□□□ -0.98
VhlP40338 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC8.96□□□□□ -0.98
VhlP40338 Gm8731-201ENSMUST00000118088 412 ntBASIC8.96□□□□□ -0.98
VhlP40338 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC8.96□□□□□ -0.98
VhlP40338 Gm15808-201ENSMUST00000119046 604 ntBASIC8.96□□□□□ -0.98
VhlP40338 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
VhlP40338 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
VhlP40338 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC8.96□□□□□ -0.98
VhlP40338 Gm27530-201ENSMUST00000184096 98 ntBASIC8.96□□□□□ -0.98
VhlP40338 Gm29067-201ENSMUST00000190821 470 ntBASIC8.96□□□□□ -0.98
VhlP40338 Gm5869-201ENSMUST00000200248 1257 ntBASIC8.96□□□□□ -0.98
VhlP40338 Gm43916-201ENSMUST00000205062 967 ntBASIC8.96□□□□□ -0.98
VhlP40338 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC8.96□□□□□ -0.98
VhlP40338 Gm44506-201ENSMUST00000206278 965 ntBASIC8.96□□□□□ -0.98
VhlP40338 Gm18056-201ENSMUST00000207670 568 ntBASIC8.96□□□□□ -0.98
VhlP40338 Gm18061-201ENSMUST00000208350 562 ntBASIC8.96□□□□□ -0.98
VhlP40338 Gm18063-201ENSMUST00000208529 568 ntBASIC8.96□□□□□ -0.98
VhlP40338 Gm18052-201ENSMUST00000208750 559 ntBASIC8.96□□□□□ -0.98
VhlP40338 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
VhlP40338 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC8.96□□□□□ -0.98
VhlP40338 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
VhlP40338 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
VhlP40338 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VhlP40338 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms