Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gm43969-201ENSMUST00000204833 535 ntBASIC9.03□□□□□ -0.96
Cdkn1aP39689 Gm33080-201ENSMUST00000205429 172 ntBASIC9.03□□□□□ -0.96
Cdkn1aP39689 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Cdkn1aP39689 AC168279.1-201ENSMUST00000214611 382 ntBASIC9.03□□□□□ -0.96
Cdkn1aP39689 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.03□□□□□ -0.96
Cdkn1aP39689 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.03□□□□□ -0.96
Cdkn1aP39689 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Gm7536-201ENSMUST00000077389 444 ntBASIC9.03□□□□□ -0.96
Cdkn1aP39689 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.03□□□□□ -0.96
Cdkn1aP39689 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cdkn1aP39689 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cdkn1aP39689 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cdkn1aP39689 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cdkn1aP39689 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cdkn1aP39689 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.02□□□□□ -0.96
Cdkn1aP39689 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Cdkn1aP39689 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.02□□□□□ -0.96
Cdkn1aP39689 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Cdkn1aP39689 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.02□□□□□ -0.97
Cdkn1aP39689 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm25951-201ENSMUST00000175330 64 ntBASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm9162-201ENSMUST00000182081 991 ntBASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC9.02□□□□□ -0.97
Cdkn1aP39689 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm19918-201ENSMUST00000194858 400 ntBASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 CT010480.2-201ENSMUST00000225424 737 ntBASIC9.02□□□□□ -0.97
Cdkn1aP39689 AC154176.1-201ENSMUST00000225897 220 ntBASIC9.02□□□□□ -0.97
Cdkn1aP39689 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.02□□□□□ -0.97
Cdkn1aP39689 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.02□□□□□ -0.97
Cdkn1aP39689 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cdkn1aP39689 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Cdkn1aP39689 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdkn1aP39689 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdkn1aP39689 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdkn1aP39689 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cdkn1aP39689 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cdkn1aP39689 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms