Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.58□□□□□ -0.88
Upk2P38575 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.58□□□□□ -0.88
Upk2P38575 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Upk2P38575 Gm23680-201ENSMUST00000083162 164 ntBASIC9.58□□□□□ -0.88
Upk2P38575 Gm10179-201ENSMUST00000086233 688 ntBASIC9.58□□□□□ -0.88
Upk2P38575 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.58□□□□□ -0.88
Upk2P38575 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.58□□□□□ -0.88
Upk2P38575 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Upk2P38575 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.58□□□□□ -0.88
Upk2P38575 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Upk2P38575 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Upk2P38575 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
Upk2P38575 AA474408-201ENSMUST00000098110 3339 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Spata33-207ENSMUST00000212760 4074 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Upk2P38575 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Upk2P38575 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.57□□□□□ -0.88
Upk2P38575 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Upk2P38575 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Gm26013-201ENSMUST00000104404 119 ntBASIC9.57□□□□□ -0.88
Upk2P38575 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Upk2P38575 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Upk2P38575 Gm12029-201ENSMUST00000120073 832 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Gm24398-201ENSMUST00000157870 109 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Upk2P38575 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Upk2P38575 Gm44329-201ENSMUST00000197469 112 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Gm42816-201ENSMUST00000198433 325 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Gm18753-201ENSMUST00000201000 566 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.57□□□□□ -0.88
Upk2P38575 Gm19091-201ENSMUST00000208120 978 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Gm39288-201ENSMUST00000210554 446 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Gm9102-201ENSMUST00000219250 465 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.57□□□□□ -0.88
Upk2P38575 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Upk2P38575 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Upk2P38575 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.57□□□□□ -0.88
Upk2P38575 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Upk2P38575 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.56□□□□□ -0.88
Upk2P38575 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Upk2P38575 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Upk2P38575 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Upk2P38575 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.56□□□□□ -0.88
Upk2P38575 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.56□□□□□ -0.88
Upk2P38575 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Upk2P38575 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.56□□□□□ -0.88
Upk2P38575 Snord23-201ENSMUST00000116828 109 ntBASIC9.56□□□□□ -0.88
Upk2P38575 Gm15264-201ENSMUST00000118050 502 ntBASIC9.56□□□□□ -0.88
Upk2P38575 Gm13019-201ENSMUST00000120000 276 ntBASIC9.56□□□□□ -0.88
Upk2P38575 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.56□□□□□ -0.88
Upk2P38575 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.56□□□□□ -0.88
Upk2P38575 Mir1943-201ENSMUST00000158276 73 ntBASIC9.56□□□□□ -0.88
Upk2P38575 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Upk2P38575 Gm19459-201ENSMUST00000176240 835 ntBASIC9.56□□□□□ -0.88
Upk2P38575 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms