Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.42□□□□□ -0.74
Slc6a11P31650 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.42□□□□□ -0.74
Slc6a11P31650 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.42□□□□□ -0.74
Slc6a11P31650 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.42□□□□□ -0.74
Slc6a11P31650 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.42□□□□□ -0.74
Slc6a11P31650 Gm17825-201ENSMUST00000206836 794 ntBASIC10.42□□□□□ -0.74
Slc6a11P31650 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.42□□□□□ -0.74
Slc6a11P31650 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.42□□□□□ -0.74
Slc6a11P31650 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.42□□□□□ -0.74
Slc6a11P31650 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.42□□□□□ -0.74
Slc6a11P31650 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.42□□□□□ -0.74
Slc6a11P31650 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.42□□□□□ -0.74
Slc6a11P31650 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.42□□□□□ -0.74
Slc6a11P31650 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc6a11P31650 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.42□□□□□ -0.74
Slc6a11P31650 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.41□□□□□ -0.74
Slc6a11P31650 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm16071-201ENSMUST00000119589 793 ntBASIC10.41□□□□□ -0.74
Slc6a11P31650 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm24074-201ENSMUST00000158178 260 ntBASIC10.41□□□□□ -0.74
Slc6a11P31650 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm3150-201ENSMUST00000166418 204 ntBASIC10.41□□□□□ -0.74
Slc6a11P31650 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a11P31650 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm17826-201ENSMUST00000189720 798 ntBASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm37301-201ENSMUST00000195412 568 ntBASIC10.41□□□□□ -0.74
Slc6a11P31650 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm44329-201ENSMUST00000197469 112 ntBASIC10.41□□□□□ -0.74
Slc6a11P31650 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.41□□□□□ -0.74
Slc6a11P31650 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a11P31650 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a11P31650 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc6a11P31650 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Slc6a11P31650 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Slc6a11P31650 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Slc6a11P31650 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc6a11P31650 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Slc6a11P31650 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.4□□□□□ -0.74
Slc6a11P31650 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC10.4□□□□□ -0.74
Slc6a11P31650 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.4□□□□□ -0.74
Slc6a11P31650 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a11P31650 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms