Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm28032-201ENSMUST00000184104 96 ntBASIC9.57□□□□□ -0.88
Cd28P31041 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.57□□□□□ -0.88
Cd28P31041 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.57□□□□□ -0.88
Cd28P31041 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.57□□□□□ -0.88
Cd28P31041 Gm44262-201ENSMUST00000204969 372 ntBASIC9.57□□□□□ -0.88
Cd28P31041 Gm31941-201ENSMUST00000209689 350 ntBASIC9.57□□□□□ -0.88
Cd28P31041 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC9.57□□□□□ -0.88
Cd28P31041 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.57□□□□□ -0.88
Cd28P31041 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.57□□□□□ -0.88
Cd28P31041 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.57□□□□□ -0.88
Cd28P31041 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Cd28P31041 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.57□□□□□ -0.88
Cd28P31041 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cd28P31041 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.57□□□□□ -0.88
Cd28P31041 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cd28P31041 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.56□□□□□ -0.88
Cd28P31041 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.56□□□□□ -0.88
Cd28P31041 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cd28P31041 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cd28P31041 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Cd28P31041 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cd28P31041 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.56□□□□□ -0.88
Cd28P31041 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cd28P31041 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Cd28P31041 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Cd28P31041 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Cd28P31041 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.56□□□□□ -0.88
Cd28P31041 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.56□□□□□ -0.88
Cd28P31041 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Cd28P31041 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.56□□□□□ -0.88
Cd28P31041 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.56□□□□□ -0.88
Cd28P31041 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Cd28P31041 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.56□□□□□ -0.88
Cd28P31041 Gm7741-201ENSMUST00000181445 989 ntBASIC9.56□□□□□ -0.88
Cd28P31041 Gm8100-201ENSMUST00000182906 988 ntBASIC9.56□□□□□ -0.88
Cd28P31041 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.56□□□□□ -0.88
Cd28P31041 AY702102-202ENSMUST00000194651 1173 ntBASIC9.56□□□□□ -0.88
Cd28P31041 Gm38266-201ENSMUST00000194931 421 ntBASIC9.56□□□□□ -0.88
Cd28P31041 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cd28P31041 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Cd28P31041 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.56□□□□□ -0.88
Cd28P31041 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.56□□□□□ -0.88
Cd28P31041 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd28P31041 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.55□□□□□ -0.88
Cd28P31041 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Cd28P31041 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Cd28P31041 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Cd28P31041 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms