Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col8a2P25318 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col8a2P25318 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col8a2P25318 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Col8a2P25318 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col8a2P25318 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Col8a2P25318 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Col8a2P25318 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.12□□□□□ -0.95
Col8a2P25318 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.12□□□□□ -0.95
Col8a2P25318 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Gm11578-201ENSMUST00000118530 459 ntBASIC9.12□□□□□ -0.95
Col8a2P25318 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.12□□□□□ -0.95
Col8a2P25318 Gm12783-201ENSMUST00000121425 397 ntBASIC9.12□□□□□ -0.95
Col8a2P25318 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Col8a2P25318 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC9.12□□□□□ -0.95
Col8a2P25318 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Col8a2P25318 Gm34379-201ENSMUST00000195036 290 ntBASIC9.12□□□□□ -0.95
Col8a2P25318 Gm6677-201ENSMUST00000195100 441 ntBASIC9.12□□□□□ -0.95
Col8a2P25318 Gm33080-201ENSMUST00000205429 172 ntBASIC9.12□□□□□ -0.95
Col8a2P25318 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 AC130477.1-201ENSMUST00000226982 420 ntBASIC9.12□□□□□ -0.95
Col8a2P25318 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Col8a2P25318 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Col8a2P25318 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.12□□□□□ -0.95
Col8a2P25318 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Col8a2P25318 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC9.12□□□□□ -0.95
Col8a2P25318 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Col8a2P25318 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col8a2P25318 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.11□□□□□ -0.95
Col8a2P25318 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.11□□□□□ -0.95
Col8a2P25318 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.11□□□□□ -0.95
Col8a2P25318 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.11□□□□□ -0.95
Col8a2P25318 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Gm15003-201ENSMUST00000118884 446 ntBASIC9.11□□□□□ -0.95
Col8a2P25318 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Col8a2P25318 Gm5529-201ENSMUST00000165691 891 ntBASIC9.11□□□□□ -0.95
Col8a2P25318 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col8a2P25318 Gm42430-201ENSMUST00000197209 616 ntBASIC9.11□□□□□ -0.95
Col8a2P25318 AC124457.1-201ENSMUST00000198845 120 ntBASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms