Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tnfrsf1bP25119 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm13505-201ENSMUST00000121666 817 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm22442-201ENSMUST00000157256 144 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm45219-201ENSMUST00000205602 465 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm9102-201ENSMUST00000219250 465 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfrsf1bP25119 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Gm44863-201ENSMUST00000207613 1422 ntBASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfrsf1bP25119 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms