Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm6331-201ENSMUST00000217890 450 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 AC165260.4-201ENSMUST00000225924 724 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Hoxd8P23463 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxd8P23463 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxd8P23463 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm12418-201ENSMUST00000118116 942 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.42□□□□□ -0.58
Hoxd8P23463 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm20493-201ENSMUST00000173706 213 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm24954-201ENSMUST00000178831 110 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Mir6387-201ENSMUST00000184042 108 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Mir8111-201ENSMUST00000184463 137 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm28671-201ENSMUST00000187036 692 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm8384-201ENSMUST00000190905 704 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.42□□□□□ -0.58
Hoxd8P23463 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Hoxd8P23463 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm18871-201ENSMUST00000218655 745 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 CT030194.1-201ENSMUST00000225507 532 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hoxd8P23463 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.42□□□□□ -0.58
Hoxd8P23463 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxd8P23463 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Hoxd8P23463 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hoxd8P23463 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Hoxd8P23463 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxd8P23463 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm6441-201ENSMUST00000120983 696 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm15031-201ENSMUST00000121341 210 ntBASIC11.41□□□□□ -0.58
Hoxd8P23463 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms