Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pcdh1F7BJK1 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm24891-201ENSMUST00000104391 136 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm15515-201ENSMUST00000117827 822 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm15566-201ENSMUST00000121130 590 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm25492-201ENSMUST00000157383 129 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm24992-201ENSMUST00000157412 130 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Olfr584-201ENSMUST00000098210 964 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.85□□□□□ -0.83
Pcdh1F7BJK1 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm14193-201ENSMUST00000105067 153 ntBASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.84□□□□□ -0.83
Pcdh1F7BJK1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms