Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.27□□□□□ -0.61
Atf6F6VAN0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.26□□□□□ -0.61
Atf6F6VAN0 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm22993-201ENSMUST00000175423 254 ntBASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm8197-202ENSMUST00000193422 934 ntBASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm45118-201ENSMUST00000208928 825 ntBASIC11.26□□□□□ -0.61
Atf6F6VAN0 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm18165-201ENSMUST00000217426 928 ntBASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Nsd1-205ENSMUST00000224693 852 ntBASIC11.26□□□□□ -0.61
Atf6F6VAN0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.26□□□□□ -0.61
Atf6F6VAN0 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6F6VAN0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm22885-201ENSMUST00000157410 107 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm18827-201ENSMUST00000188341 790 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm18351-201ENSMUST00000188646 883 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm8959-201ENSMUST00000213150 571 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms