Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Dhx30-203ENSMUST00000165596 3726 ntTSL 5 BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Zeb2-215ENSMUST00000200844 4064 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 C78197-201ENSMUST00000152781 3417 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Cdh1-201ENSMUST00000000312 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Fam110b-202ENSMUST00000108380 3119 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Tcp10b-201ENSMUST00000086787 2327 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm37699-201ENSMUST00000194753 3338 ntBASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 G3bp2-201ENSMUST00000113127 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Zc3h10-201ENSMUST00000040572 3721 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Gm3880A0A1B0GSB3 Ect2l-203ENSMUST00000207827 2730 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Tpmt-201ENSMUST00000021806 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Mc1r-201ENSMUST00000098324 3638 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gpn1-201ENSMUST00000076949 3144 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Cnbd2-203ENSMUST00000109580 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm43764-201ENSMUST00000202553 3172 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm46218-202ENSMUST00000215520 1956 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Srgap1-202ENSMUST00000081688 7787 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gpr85-202ENSMUST00000115491 2165 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm8805-201ENSMUST00000117848 313 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm15264-201ENSMUST00000118050 502 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm3436-201ENSMUST00000179930 840 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm27441-201ENSMUST00000185000 105 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm37301-201ENSMUST00000195412 568 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm42588-201ENSMUST00000200538 1297 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm44711-201ENSMUST00000205414 1264 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm44772-201ENSMUST00000207623 1191 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Gm3880A0A1B0GSB3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms