Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Gm22876-201ENSMUST00000175450 298 ntBASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Gm38038-201ENSMUST00000193803 259 ntBASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 AC130217.1-201ENSMUST00000224146 909 ntBASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 AC123533.3-201ENSMUST00000228056 454 ntBASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cacna1fQ9JIS7 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Gm30055-201ENSMUST00000203175 803 ntBASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Gm8730-201ENSMUST00000076373 954 ntBASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Gm43625-201ENSMUST00000199177 1539 ntBASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Gm10344-201ENSMUST00000193498 1419 ntBASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Gm23432-201ENSMUST00000157181 131 ntBASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cacna1fQ9JIS7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Gm13286-201ENSMUST00000117750 537 ntBASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Gm6500-201ENSMUST00000119412 451 ntBASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Gm23999-201ENSMUST00000158057 104 ntBASIC12.28□□□□□ -0.44
Cacna1fQ9JIS7 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms