Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.01□□□□□ -0.49
Prpf31Q8CCF0 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm33366-201ENSMUST00000195583 3827 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm24791-201ENSMUST00000104284 131 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm11801-201ENSMUST00000117807 746 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm4993-201ENSMUST00000118719 1174 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm12783-201ENSMUST00000121425 397 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm11980-201ENSMUST00000121445 986 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm9372-201ENSMUST00000168454 430 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm20781-201ENSMUST00000193154 693 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm21736-201ENSMUST00000195399 693 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 Gm31274-201ENSMUST00000197356 229 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 AC154361.2-201ENSMUST00000224747 943 ntBASIC12□□□□□ -0.49
Prpf31Q8CCF0 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf31Q8CCF0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Gm13549-201ENSMUST00000118339 796 ntBASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Gm26989-201ENSMUST00000182608 749 ntBASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Prpf31Q8CCF0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms