Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Gm13351-201ENSMUST00000118087 414 ntBASIC12.79□□□□□ -0.36
Vps53Q8CCB4 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.79□□□□□ -0.36
Vps53Q8CCB4 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps53Q8CCB4 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gm25148-201ENSMUST00000104611 123 ntBASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gm25545-201ENSMUST00000122673 323 ntBASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Mir6923-201ENSMUST00000184592 72 ntBASIC12.78□□□□□ -0.36
Vps53Q8CCB4 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps53Q8CCB4 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Vps53Q8CCB4 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gm15329-201ENSMUST00000121408 155 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gm15549-201ENSMUST00000121595 622 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Gm22379-201ENSMUST00000157480 131 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.77□□□□□ -0.37
Vps53Q8CCB4 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.77□□□□□ -0.37
Vps53Q8CCB4 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms