Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gm21142-201ENSMUST00000179999 2604 ntBASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim9Q8C7M3 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm12899-201ENSMUST00000120565 551 ntBASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm33080-201ENSMUST00000205429 172 ntBASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm32111-201ENSMUST00000207689 846 ntBASIC12.05□□□□□ -0.48
Trim9Q8C7M3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.05□□□□□ -0.48
Trim9Q8C7M3 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.05□□□□□ -0.48
Trim9Q8C7M3 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim9Q8C7M3 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm12389-201ENSMUST00000117696 418 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm13019-201ENSMUST00000120000 276 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm12791-201ENSMUST00000120788 655 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm12516-201ENSMUST00000120819 385 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm13117-201ENSMUST00000120894 691 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm5244-201ENSMUST00000164001 339 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm44814-201ENSMUST00000207018 434 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm19091-201ENSMUST00000208120 978 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm8162-201ENSMUST00000213951 665 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim9Q8C7M3 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms