Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC15.31■□□□□ 0.04
Usp54Q8BL06 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Gm5291-201ENSMUST00000201965 899 ntBASIC15.31■□□□□ 0.04
Usp54Q8BL06 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Gm18391-201ENSMUST00000217189 658 ntBASIC15.31■□□□□ 0.04
Usp54Q8BL06 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp54Q8BL06 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Usp54Q8BL06 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Gm15132-201ENSMUST00000118581 652 ntBASIC15.3■□□□□ 0.04
Usp54Q8BL06 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Gm25154-201ENSMUST00000157123 119 ntBASIC15.3■□□□□ 0.04
Usp54Q8BL06 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Gm36980-201ENSMUST00000195643 622 ntBASIC15.3■□□□□ 0.04
Usp54Q8BL06 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Gm30652-201ENSMUST00000199103 430 ntBASIC15.3■□□□□ 0.04
Usp54Q8BL06 Gm44173-201ENSMUST00000204316 132 ntBASIC15.3■□□□□ 0.04
Usp54Q8BL06 Gm5650-201ENSMUST00000209641 598 ntBASIC15.3■□□□□ 0.04
Usp54Q8BL06 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp54Q8BL06 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Gm24368-201ENSMUST00000175388 106 ntBASIC15.29■□□□□ 0.04
Usp54Q8BL06 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Gm8991-201ENSMUST00000073014 1075 ntBASIC15.29■□□□□ 0.04
Usp54Q8BL06 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 AC130671.3-201ENSMUST00000227393 1897 ntBASIC15.29■□□□□ 0.04
Usp54Q8BL06 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp54Q8BL06 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp54Q8BL06 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp54Q8BL06 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp54Q8BL06 Gm14571-201ENSMUST00000118292 570 ntBASIC15.28■□□□□ 0.04
Usp54Q8BL06 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Usp54Q8BL06 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp54Q8BL06 Gm23081-201ENSMUST00000157845 297 ntBASIC15.28■□□□□ 0.04
Usp54Q8BL06 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp54Q8BL06 Mir3091-201ENSMUST00000175086 76 ntBASIC15.28■□□□□ 0.04
Usp54Q8BL06 Gm3052-201ENSMUST00000186409 829 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms