Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh8Q7TSK3 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Snord17-201ENSMUST00000104526 238 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Gm12663-201ENSMUST00000118481 958 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Gm14234-201ENSMUST00000119539 845 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Gm14213-201ENSMUST00000119778 768 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Gm4862-201ENSMUST00000170405 438 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Gm5700-201ENSMUST00000191483 989 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh8Q7TSK3 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Pcdh8Q7TSK3 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Snord23-201ENSMUST00000116828 109 ntBASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh8Q7TSK3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms