Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
VcanQ62059 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Rab3gap1-207ENSMUST00000212506 2967 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
VcanQ62059 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
VcanQ62059 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Gm15580-201ENSMUST00000121587 556 ntBASIC9.95□□□□□ -0.82
VcanQ62059 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.95□□□□□ -0.82
VcanQ62059 Gm8557-201ENSMUST00000220777 475 ntBASIC9.95□□□□□ -0.82
VcanQ62059 AC154687.1-201ENSMUST00000224875 677 ntBASIC9.95□□□□□ -0.82
VcanQ62059 Fam209-201ENSMUST00000029007 698 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
VcanQ62059 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
VcanQ62059 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.94□□□□□ -0.82
VcanQ62059 AC125108.1-201ENSMUST00000218986 2330 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 H2afb2-201ENSMUST00000118616 348 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
VcanQ62059 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm14856-201ENSMUST00000121548 613 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC9.94□□□□□ -0.82
VcanQ62059 Gm34780-201ENSMUST00000193896 949 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Gm32255-201ENSMUST00000219456 1349 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Rad52-212ENSMUST00000162461 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
VcanQ62059 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC9.94□□□□□ -0.82
VcanQ62059 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
VcanQ62059 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.94□□□□□ -0.82
VcanQ62059 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
VcanQ62059 Gm15355-201ENSMUST00000118929 285 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm26241-201ENSMUST00000174944 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm23976-201ENSMUST00000175001 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm22463-201ENSMUST00000175274 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm22547-201ENSMUST00000175281 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm22913-201ENSMUST00000175297 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm23282-201ENSMUST00000175306 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm25972-201ENSMUST00000175374 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm22414-201ENSMUST00000175466 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm26235-201ENSMUST00000175533 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm25084-201ENSMUST00000175556 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm24973-201ENSMUST00000175588 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm23292-201ENSMUST00000175618 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm23646-201ENSMUST00000178119 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm24643-201ENSMUST00000178305 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm24302-201ENSMUST00000178350 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm26386-201ENSMUST00000178407 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm25458-201ENSMUST00000178981 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm5435-201ENSMUST00000179295 1150 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm22825-201ENSMUST00000179444 101 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
VcanQ62059 Gm28381-201ENSMUST00000188403 193 ntBASIC9.94□□□□□ -0.82
VcanQ62059 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
VcanQ62059 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VcanQ62059 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms